CDS

Accession Number TCMCG057C15482
gbkey CDS
Protein Id XP_018477409.1
Location join(3571495..3571543,3571546..3571697,3571901..3572035,3572128..3572326,3572417..3572565,3572651..3572734,3572822..3573061)
Gene LOC108848517
GeneID 108848517
Organism Raphanus sativus

Protein

Length 336aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018621907.1
Definition PREDICTED: LOW QUALITY PROTEIN: UPF0725 protein At4g28920-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R02918        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K01866        [VIEW IN KEGG]
EC 6.1.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004831        [VIEW IN EMBL-EBI]
GO:0004832        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006438        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACTGAGATTGCGATCTTGCTTCCAAGCATCGGAGATGAACAGCCGCCGCGTAAGCGGAAATTGGAATCTTCACGAAGCTCAGGCGCTGCTGCTGCTCCGATACAGAGTTTCCCGAAGGTTGATTACAATCCATGGGATGACGAAGAGGATGACCCTGTGATCGAGAAGGAGTACAACCGTCAATTCGTAGAGTCCGACGGTTTTGATGTTGATTACTTCTATCTCCCGTATGGTGGTGGACTAGTCCCTCACATAGTGGAAGACAAGTATGATTACCCATATGACGTTGGCTTGTTTAGTAGACTTGGCCTTCACTGTTACAATCTTGAGAAGGGAACCAGCCTGAAATTGGCTGCTATAAACAAATACAACGATAAGCTGAGGTTCACTCGGTGCCTCTGCTACTACATAACGTTGGAGGCCATTGACACATCCACCAACTCTCTCTGCAATTTTCAGACGTGTGTTTTCAAAGATTTCCTTCCGGAACAGGCATCCTTTCTGGCACAGACCGAAATTTCCAGACTAAAAGTTCCTAGTGGCCCTCGACCTCCTACATATGATGGGCCTGAGAGAATATGGAACGACGATGCAGTAGATGATTCTTACAAAGGTAAAATGCCCAAGTGGTTCACCAAGGATGAGATGGCTGCGATTAGCACTAAGGGGCAGTTTTATGAGTTGCAAGAATCAGACTTGCAAGGAAATGAGTGGCTTCATATGTATGCTGAGTTTGCTTTCCACTATAAGTGGATGGCACATGAGAGCGAACTGAGGCCATTTCTACCATTGGAAATCAAGAAGGTAATTATACAAACCAAGGAAGAGTCGCAGCCATGCATGAAGCTCAAGGCCAACAATGCCATCTTCTATATTATCTTCAAAGGCAATGGCGATCCGAGTGGTGCTCCCGTGGAGTACCGAGCGGTTGTAAGGAAAACCATGGATGGGATTCCCGGACACATTTGCTTGGAAGTCGACTGCTTAGCCTACAAATCCAGTTGA
Protein:  
MTEIAILLPSIGDEQPQXRKRKLESSRSSGAAAAPIQSFPKVDYNPWDDEEDDPVIEKEYNRQFVESDGFDVDYFYLPYGGGLVPHIVEDKYDYPYDVGLFSRLGLHCYNLEKGTSLKLAAINKYNDKLRFTRCLCYYITLEAIDTSTNSLCNFQTCVFKDFLPEQASFLAQTEISRLKVPSGPRPPTYDGPERIWNDDAVDDSYKGKMPKWFTKDEMAAISTKGQFYELQESDLQGNEWLHMYAEFAFHYKWMAHESELRPFLPLEIKKVIIQTKEESQPCMKLKANNAIFYIIFKGNGDPSGAPVEYRAVVRKTMDGIPGHICLEVDCLAYKSS